populations

Provide utility functions for generating antibody populations in immunological algorithms.

Module: aisp.base.immune
Import: from aisp.base.immune import populations

Functions

generate_random_antibodies

def generate_random_antibodies(
    n_samples: int,
    n_features: int,
    feature_type: FeatureTypeAll = "continuous-features",
    bounds: Optional[npt.NDArray[np.float64]] = None,
) -> npt.NDArray:
    ...

Generate a random antibody population.

Parameters

Name	Type	Default	Description
n_samples	int	-	Number of antibodies (samples) to generate.
n_features	int	-	Number of features (dimensions) for each antibody.
feature_type	FeatureTypeAll	"continuous-features"	Specifies the type of features: "continuous-features", "binary-features", "ranged-features", or "permutation-features".
bounds	npt.NDArray[np.float64]	None	Array (n_features, 2) with min and max per dimension.

Returns

Type	Description
npt.NDArray	Array of shape (n_samples, n_features) containing the generated antibodies.

Raises

Exception	Description
ValueError	If the number of features is less than or equal to zero.